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Publication List of Martin Brehm

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1M. Brehm, B. Kirchner*:
"TRAVIS – A Free Analyzer and Visualizer for Monte Carlo and Molecular Dynamics Trajectories"
J. Chem. Inf. Model. 2011, 51 (8), 2007–2023.     (900 citations,  DOI  10.1021/ci200217w ) ⭳Bib
⮞ see all citing articles
2M. Thomas, M. Brehm, R. Fligg, P. Vöhringer, B. Kirchner*:
"Computing Vibrational Spectra from ab initio Molecular Dynamics"
Phys. Chem. Chem. Phys. 2013, 15, 6608–6622.     (378 citations,  DOI  10.1039/C3CP44302G ) ⭳Bib
Cover Art
3M. Brehm*, M. Thomas, S. Gehrke, B. Kirchner:
"TRAVIS – A Free Analyzer for Trajectories from Molecular Simulation"
J. Chem. Phys. 2020, 152 (16), 164105.     (327 citations,  DOI  10.1063/5.0005078 ) ⭳Bib
Open Access
4M. Brehm, H. Weber, A. S. Pensado, A. Stark, B. Kirchner*:
"Proton Transfer and Polarity Changes in Ionic Liquid–Water Mixtures: A Perspective on Hydrogen Bonds from ab initio Molecular Dynamics at the Example of 1-Ethyl-3-Methylimidazolium Acetate–Water Mixtures—Part 1"
Phys. Chem. Chem. Phys. 2012, 14, 5030–5044.     (136 citations,  DOI  10.1039/C2CP23983C ) ⭳Bib
5M. Kohagen, M. Brehm, J. Thar, W. Zhao, F. Müller-Plathe, B. Kirchner*:
"Performance of Quantum Chemically Derived Charges and Persistence of Ion Cages in Ionic Liquids. A Molecular Dynamics Simulations Study of 1-n-Butyl-3-Methylimidazolium Bromide"
J. Phys. Chem. B 2011, 115 (4), 693–702.     (134 citations,  DOI  10.1021/jp109612k ) ⭳Bib
6M. Kohagen, M. Brehm, Y. Lingscheid, R. Giernoth, J. Sangoro, F. Kremer, S. Naumov, C. Iacob, J. Kärger, R. Valiullin, B. Kirchner*:
"How Hydrogen Bonds Influence the Mobility of Imidazolium-Based Ionic Liquids. A Combined Theoretical and Experimental Study of 1-n-Butyl-3-Methylimidazolium Bromide"
J. Phys. Chem. B 2011, 115 (51), 15280–15288.     (114 citations,  DOI  10.1021/jp206974h ) ⭳Bib
7J. Thar, M. Brehm, A. P. Seitsonen, B. Kirchner*:
"Unexpected Hydrogen Bond Dynamics in Imidazolium-Based Ionic Liquids"
J. Phys. Chem. B 2009, 113 (46), 15129–15132.     (110 citations,  DOI  10.1021/jp908110j ) ⭳Bib
8O. Hollóczki*, D. S. Firaha, J. Friedrich, M. Brehm, R. Cybik, M. Wild, A. Stark, B. Kirchner*:
"Carbene Formation in Ionic Liquids: Spontaneous, Induced, or Prohibited?"
J. Phys. Chem. B 2013, 117 (19), 5898–5907.     (107 citations,  DOI  10.1021/jp4004399 ) ⭳Bib
9O. Hollóczki, M. Macchiagodena, H. Weber, M. Thomas, M. Brehm, A. Stark, O. Russina, A. Triolo, B. Kirchner*:
"Triphilic Ionic-Liquid Mixtures: Fluorinated and Non-Fluorinated Aprotic Ionic-Liquid Mixtures"
ChemPhysChem 2015, 16 (15), 3325–3333.     (103 citations,  DOI  10.1002/cphc.201500473 ) ⭳Bib
Open Access
10M. Brehm, H. Weber, M. Thomas, O. Hollóczki, B. Kirchner*:
"Domain Analysis in Nanostructured Liquids: A Post-Molecular Dynamics Study at the Example of Ionic Liquids"
ChemPhysChem 2015, 16 (15), 3271–3277.     (99 citations,  DOI  10.1002/cphc.201500471 ) ⭳Bib
11M. Thomas*, M. Brehm, B. Kirchner*:
"Voronoi Dipole Moments for the Simulation of Bulk Phase Vibrational Spectra"
Phys. Chem. Chem. Phys. 2015, 17, 3207–3213.     (89 citations,  DOI  10.1039/C4CP05272B ) ⭳Bib
12M. Brüssel, M. Brehm, A. S. Pensado, F. Malberg, M. Ramzan, A. Stark*, B. Kirchner*:
"On the Ideality of Binary Mixtures of Ionic Liquids"
Phys. Chem. Chem. Phys. 2012, 14, 13204–13215.     (86 citations,  DOI  10.1039/C2CP41926B ) ⭳Bib
13A. S. Pensado, M. Brehm, J. Thar, A. P. Seitsonen, B. Kirchner*:
"Effect of Dispersion on the Structure and Dynamics of the Ionic Liquid 1-Ethyl-3-Methylimidazolium Thiocyanate"
ChemPhysChem 2012, 13 (7), 1845–1853.     (80 citations,  DOI  10.1002/cphc.201100917 ) ⭳Bib
14M. Thomas, M. Brehm, O. Hollóczki, Z. Kelemen, L. Nyulászi, T. Pasinszki*, B. Kirchner*:
"Simulating the Vibrational Spectra of Ionic Liquid Systems: 1-Ethyl-3-Methylimidazolium Acetate and its Mixtures"
J. Chem. Phys. 2014, 141, 024510.     (76 citations,  DOI  10.1063/1.4887082 ) ⭳Bib
15S. Gehrke, M. von Domaros, R. Clark, O. Hollóczki, M. Brehm, T. Welton, A. Luzar, B. Kirchner*:
"Structure and Lifetimes in Ionic Liquids and their Mixtures"
Faraday Discuss. 2018, 206, 219–245.     (70 citations,  DOI  10.1039/C7FD00166E ) ⭳Bib
16K. Wendler, M. Brehm, F. Malberg, B. Kirchner, L. Delle Site*:
"Short Time Dynamics of Ionic Liquids in AIMD-Based Power Spectra"
J. Chem. Theory Comput. 2012, 8 (5), 1570–1579.     (67 citations,  DOI  10.1021/ct300152t ) ⭳Bib
17M. Brüssel, M. Brehm, T. Voigt, B. Kirchner*:
"Ab initio Molecular Dynamics Simulations of a Binary System of Ionic Liquids"
Phys. Chem. Chem. Phys. 2011, 13, 13617–13620.     (66 citations,  DOI  10.1039/C1CP21550G ) ⭳Bib
18S. Zahn, M. Brehm, M. Brüssel, O. Hollóczki, M. Kohagen, S. B. C. Lehmann, F. Malberg, A. S. Pensado, M. Schöppke, H. Weber, B. Kirchner*:
"Understanding Ionic Liquids from Theoretical Methods"
J. Mol. Liq. 2014, 192, 71–76.     (55 citations,  DOI  10.1016/j.molliq.2013.08.015 ) ⭳Bib
19M. Cooper, A. Wagner, D. Wondrousch, F. Sonntag, A. Sonnabend, M. Brehm, G. Schüürmann, L. Adrian*:
"Anaerobic Microbial Transformation of Halogenated Aromatics and Fate Prediction Using Electron Density Modeling"
Environ. Sci. Technol. 2015, 49 (10), 6018–6028.     (54 citations,  DOI  10.1021/acs.est.5b00303 ) ⭳Bib
20M. Thomas, M. Brehm, O. Hollóczki*, B. Kirchner*:
"How Can a Carbene be Active in an Ionic Liquid?"
Chem. Eur. J 2014, 20 (6), 1622–1629.     (48 citations,  DOI  10.1002/chem.201303329 ) ⭳Bib
21M. Brehm, H. Weber, A. S. Pensado, A. Stark, B. Kirchner*:
"Liquid Structure and Cluster Formation in Ionic Liquid/Water Mixtures – An Extensive ab initio Molecular Dynamics Study on 1-Ethyl-3-Methylimidazolium Acetate/Water Mixtures – Part 2"
Z. Phys. Chem. 2013, 227, 177–203.     (47 citations,  DOI  10.1524/zpch.2012.0327 ) ⭳Bib
22M. Brehm*, M. Pulst, J. Kressler, D. Sebastiani:
"Triazolium-Based Ionic Liquids – A Novel Class of Cellulose Solvents"
J. Phys. Chem. B 2019, 123 (18), 3994–4003.     (42 citations,  DOI  10.1021/acs.jpcb.8b12082 ) ⭳Bib
Cover ArtOpen Access
23S. Pylaeva, M. Brehm, D. Sebastiani*:
"Salt Bridge in Aqueous Solution: Strong Structural Motifs but Weak Enthalpic Effects"
Sci. Rep. 2018, 8, 13626.     (36 citations,  DOI  10.1038/s41598-018-31935-z ) ⭳Bib
Open Access
24A. Triolo*, F. Lo Celso, M. Brehm, V. Di Lisio, O. Russina*:
"Liquid Structure of a Choline Chloride-Water Natural Deep Eutectic Solvent: A Molecular Dynamics Characterization"
J. Mol. Liq. 2021, 331, 115750.     (36 citations,  DOI  10.1016/j.molliq.2021.115750 ) ⭳Bib
25A. Stark*, M. Brehm, M. Brüssel, S. B. C. Lehmann, A. S. Pensado, M. Schöppke, B. Kirchner:
"A Theoretical and Experimental Chemist’s Joint View on Hydrogen Bonding in Ionic Liquids and Their Binary Mixtures"
Top. Curr. Chem. 2014, 351, 149–187.     (32 citations,  DOI  10.1007/128_2013_485 ) ⭳Bib
26R. Giernoth*, A. Bröhl, M. Brehm, Y. Lingscheid:
"Interactions in Ionic Liquids probed by in situ NMR Spectroscopy"
J. Mol. Liq. 2014, 192, 55–58.     (31 citations,  DOI  10.1016/j.molliq.2013.07.010 ) ⭳Bib
27F. Malberg, M. Brehm, O. Hollóczki, A. S. Pensado, B. Kirchner*:
"Understanding the Evaporation of Ionic Liquids using the Example of 1-Ethyl-3-Methylimidazolium Ethylsulfate"
Phys. Chem. Chem. Phys. 2013, 15, 18424–18436.     (28 citations,  DOI  10.1039/C3CP52966E ) ⭳Bib

28M. Brehm*, M. Thomas:
"Computing Bulk Phase Raman Optical Activity Spectra from ab initio Molecular Dynamics Simulations"
J. Phys. Chem. Lett. 2017, 8 (14), 3409–3414.     (24 citations,  DOI  10.1021/acs.jpclett.7b01616 ) ⭳Bib
29M. Brehm*, J. Radicke, M. Pulst, F. Shaabani, D. Sebastiani, J. Kressler:
"Dissolving Cellulose in 1,2,3-Triazolium- and Imidazolium-Based Ionic Liquids with Aromatic Anions"
Molecules 2020, 25 (15), 3539.     (22 citations,  DOI  10.3390/molecules25153539 ) ⭳Bib
Open Access
30S. Roy, M. Brehm, S. Sharma, F. Wu, D. Maltsev, P. Halstenberg, L. Gallington, S. Mahurin, S. Dai, A. Ivanov*, C. Margulis*, V. Bryantsev*:
"Unraveling Local Structure of Molten Salts via X-Ray Scattering, Raman Spectroscopy, and ab initio Molecular Dynamics"
J. Phys. Chem. B 2021, 125 (22), 5971–5982.     (21 citations,  DOI  10.1021/acs.jpcb.1c03786 ) ⭳Bib
Cover ArtOpen Access
31M. Brehm*, D. Sebastiani:
"Simulating Structure and Dynamics in Small Droplets of 1-Ethyl-3-Methylimidazolium Acetate"
J. Chem. Phys. 2018, 148, 193802.     (19 citations,  DOI  10.1063/1.5010342 ) ⭳Bib
32A. Triolo*, M. E. Di Pietro, A. Mele, F. Lo Celso, M. Brehm, V. Di Lisio, A. Martinelli, P. Chater, O. Russina*:
"Liquid Structure and Dynamics in the Choline Acetate:Urea 1:2 Deep Eutectic Solvent"
J. Chem. Phys. 2021, 154, 244501.     (17 citations,  DOI  10.1063/5.0054048 ) ⭳Bib
Open Access
33M. Mukherjee, D. Tripathi, M. Brehm, C. Riplinger, A. K. Dutta*:
"Efficient EOM-CC-Based Protocol for the Calculation of Electron Affinity of Solvated Nucleobases: Uracil as a Case Study"
J. Chem. Theory Comput. 2021, 17 (1), 105–116.     (16 citations,  DOI  10.1021/acs.jctc.0c00655 ) ⭳Bib
34C. Slawik, C. Rickmeyer, M. Brehm, A. Böhme, G. Schüürmann*:
"Glutathione Adduct Patterns of Michael-Acceptor Carbonyls"
Environ. Sci. Technol. 2017, 51 (7), 4018–4026.     (13 citations,  DOI  10.1021/acs.est.6b04981 ) ⭳Bib
35M. Brehm*, M. Thomas:
"Computing Bulk Phase Resonance Raman Spectra from ab initio Molecular Dynamics and Real-Time TDDFT"
J. Chem. Theory Comput. 2019, 15 (7), 3901–3905.     (13 citations,  DOI  10.1021/acs.jctc.9b00512 ) ⭳Bib
36J. Hunold, J. Eisermann, M. Brehm, D. Hinderberger*:
"Characterization of Aqueous Lower Polarity Solvation Shells Around Amphiphilic TEMPO Radicals in Water"
J. Phys. Chem. B 2020, 124 (39), 8601–8609.     (13 citations,  DOI  10.1021/acs.jpcb.0c04863 ) ⭳Bib
37M. Brehm*, M. Thomas:
"An Efficient Lossless Compression Algorithm for Trajectories of Atom Positions and Volumetric Data"
J. Chem. Inf. Model. 2018, 58 (10), 2092–2107.     (12 citations,  DOI  10.1021/acs.jcim.8b00501 ) ⭳Bib
38M. Brüssel, E. Perlt, M. von Domaros, M. Brehm, B. Kirchner*:
"A One-Parameter Quantum Cluster Equilibrium Approach"
J. Chem. Phys. 2012, 137, 164107.     (11 citations,  DOI  10.1063/1.4759154 ) ⭳Bib
39U. Cerajewski, J. Träger, S. Henkel, A. H. Roos, M. Brehm, D. Hinderberger*:
"Nanoscopic Structures and Molecular Interactions Leading to a Dystectic and two Eutectic Points in [EMIm][Cl] / Urea Mixtures"
Phys. Chem. Chem. Phys. 2018, 20, 29591–29600.     (11 citations,  DOI  10.1039/C8CP04912B ) ⭳Bib
Cover Art
40M.-A. Codescu, M. Weiß, M. Brehm, O. Kornilov, D. Sebastiani*, E. T. J. Nibbering*:
"Switching Between Proton Vacancy and Excess Proton Transfer Pathways in the Reaction Between 7-Hydroxyquinoline and Formate"
J. Phys. Chem. A 2021, 125 (9), 1845–1859.     (9 citations,  DOI  10.1021/acs.jpca.0c10191 ) ⭳Bib
Open Access
41E. Roos, M. Brehm*:
"A Force Field for Bio-Polymers in Ionic Liquids (BILFF) – Part 1: [EMIm][OAc] / Water Mixtures"
Phys. Chem. Chem. Phys. 2021, 23, 1242–1253.     (8 citations,  DOI  10.1039/D0CP04537C ) ⭳Bib
42M. Brehm, A. Kafka, M. Bamler, R. Kühne, G. Schüürmann, L. Sikk, J. Burk, P. Burk, T. Tamm, K. Tämm, S. Pokhrel, L. Mädler, A. Kahru, V. Aruoja, M. Sihtmäe, J. Scott-Fordsmand, P. B. Sorensen, L. Escorihuela, C. P. Roca, A. Fernández, F. Giralt, R. Rallo*:
"An Integrated Data-Driven Strategy for Safe-by-Design Nanoparticles: The FP7 MODERN Project."
Adv. Exp. Med. Biol. 2017, 947, 257–301.     (7 citations,  DOI  10.1007/978-3-319-47754-1_9 ) ⭳Bib
43M. Weiß, M. Brehm*:
"Exploring Free Energy Profiles of Enantioselective Organocatalytic Aldol Reactions under Full Solvent Influence"
Molecules 2020, 25 (24), 5861.     (7 citations,  DOI  10.3390/molecules25245861 ) ⭳Bib
Open Access
44Y. Yang, J. Cheramy, M. Brehm*, Y. Xu*:
"Raman Optical Activity of N-Acetyl-L-Cysteine in Water and in Methanol: The “Clusters-in-a-Liquid” Model and ab initio Molecular Dynamics Simulations"
ChemPhysChem 2022, 23 (11), e202200161.     (6 citations,  DOI  10.1002/cphc.202200161 ) ⭳Bib
45M. Brehm, G. Saddiq, T. Watermann, D. Sebastiani*:
"Influence of Small Fluorophilic and Lipophilic Organic Molecules on Dipalmitoylphosphatidylcholine Bilayers"
J. Phys. Chem. B 2017, 121 (35), 8311–8321.     (5 citations,  DOI  10.1021/acs.jpcb.7b06520 ) ⭳Bib
46C. Dreßler, G. Kabbe, M. Brehm, D. Sebastiani*:
"Dynamical Matrix Propagator Scheme for Large-Scale Proton Dynamics Simulations"
J. Chem. Phys. 2020, 152 (11), 114114.     (5 citations,  DOI  10.1063/1.5140635 ) ⭳Bib
47R. Chahal*, S. Roy, M. Brehm, S. Banerjee, V. Bryantsev, S. Lam*:
"Transferable Deep Learning Potential Reveals Intermediate-Range Ordering Effects in LiF–NaF–ZrF4 Molten Salt"
JACS Au 2022, 2 (12), 2693–2702.     (5 citations,  DOI  10.1021/jacsau.2c00526 ) ⭳Bib
Open Access
48L. Scarbath-Evers, R. Hammer, D. Golze, M. Brehm, D. Sebastiani, W. Widdra*:
"From Flat to Tilted: Gradual Interfaces in Organic Thin Film Growth"
Nanoscale 2020, 12, 3834–3845.     (4 citations,  DOI  10.1039/C9NR06592J ) ⭳Bib
Open Access
49C. Dreßler, G. Kabbe, M. Brehm, D. Sebastiani*:
"Exploring Non-Equilibrium Molecular Dynamics of Mobile Protons in the Solid Acid CsH2PO4 on the Micrometer and Microsecond Scale"
J. Chem. Phys. 2020, 152 (16), 164110.     (4 citations,  DOI  10.1063/5.0002167 ) ⭳Bib
50M. Brehm*, M. Thomas:
"Optimized Atomic Partial Charges and Radii Defined by Radical Voronoi Tessellation of Bulk Phase Simulations"
Molecules 2021, 26 (7), 1875.     (4 citations,  DOI  10.3390/molecules26071875 ) ⭳Bib
Open Access
51T. Frömbgen, J. Blasius, V. Alizadeh, A. Chaumont, M. Brehm*, B. Kirchner*:
"Cluster Analysis in Liquids: A Novel Tool in TRAVIS"
J. Chem. Inf. Model. 2022, 62 (22), 5634–5644.     (3 citations,  DOI  10.1021/acs.jcim.2c01244 ) ⭳Bib
52P. J. di Dio*, M. Brehm, B. Kirchner:
"Singular Value Decomposition for Analyzing Temperature- and Pressure-Dependent Radial Distribution Functions: Decomposition into Grund RDFs (GRDFs)"
J. Chem. Theory Comput. 2011, 7 (10), 3035–3039.     (2 citations,  DOI  10.1021/ct2003385 ) ⭳Bib
Cover Art
53S. Taherivardanjani, J. Blasius, M. Brehm, R. Dötzer, B. Kirchner*:
"Conformer Weighting and Differently Sized Cluster Weighting for Nicotine and its Phosphorus Derivatives"
J. Phys. Chem. A 2022, 126 (40), 7070–7083.     (2 citations,  DOI  10.1021/acs.jpca.2c03133 ) ⭳Bib
54C. Peschel, M. Brehm, D. Sebastiani*:
"Polyphilic Interactions as Structural Driving Force Investigated by Molecular Dynamics Simulation (Project 7)"
Polymers 2017, 9 (9), 445.     (1 citation,  DOI  10.3390/polym9090445 ) ⭳Bib
Open Access
55J. Radicke, E. Roos, D. Sebastiani, M. Brehm*, J. Kressler*:
"Lactate-Based Ionic Liquids as Chiral Solvents for Cellulose"
J. Polym. Sci. 2023, 61 (5), 372–384.     (1 citation,  DOI  10.1002/pol.20220687 ) ⭳Bib
Cover ArtOpen Access
56E. Roos, D. Sebastiani, M. Brehm*:
"A Force Field for Bio-Polymers in Ionic Liquids (BILFF) – Part 2: Cellulose in [EMIm][OAc] / Water Mixtures"
Phys. Chem. Chem. Phys. 2023, 25 (12), 8755–8766.     (1 citation,  DOI  10.1039/D2CP05636D ) ⭳Bib
57M.-A. Codescu, T. Kunze, M. Weiß, M. Brehm, O. Kornilov, D. Sebastiani*, E. T. J. Nibbering*:
"Ultrafast Proton Transfer Pathways Mediated by Amphoteric Imidazole"
J. Phys. Chem. Lett. 2023, 14, 4775–4785.     (DOI  10.1021/acs.jpclett.3c00595 ) ⭳Bib
Open Access
58E. Roos, D. Sebastiani, M. Brehm*:
"BILFF: All-Atom Force Field for Modeling Triazolium- and Benzoate-Based Ionic Liquids"
Molecules 2023, 28 (22), 7592.     (DOI  10.3390/molecules28227592 ) ⭳Bib
Open Access
59L. Köring, B. Birenheide, F. Krämer, J. O. Wenzel, R. Schoch, M. Brehm, F. Breher*, J. Paradies*:
"Synthesis of Ferrocenyl Boranes and their Application as Lewis Acids in Epoxide Rearrangements"
Eur. J. Inorg. Chem. 2024, accepted.     (DOI  10.1002/ejic.202400057 ) ⭳Bib
Open Access
60E. Roos, C. Gradaus, D. Sebastiani, M. Brehm*:
"A Force Field for the Solubility of Cellulose in DMSO/Ionic Liquids"
Cellulose 2024, accepted.     (DOI  10.1007/s10570-024-05854-4 ) ⭳Bib
61M. Lass, T. Kenter, C. Plessl, M. Brehm*:
"Characterizing Microheterogeneity in Liquid Mixtures via Local Density Fluctuations"
Entropy 2024, 26 (4), 322.     (DOI  10.3390/e26040322 ) ⭳Bib
Open Access