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TRAVIS – Trajectory Analyzer and Visualizer

TRAVIS

TRAVIS, which stands for Trajectory Analyzer and Visualizer, is a software tool which can compute a plethora of functions and histograms from molecular dynamics and Monte Carlo simulation trajectories. I am the main developer of the TRAVIS program package.

Please visit the TRAVIS website:  www.travis-analyzer.de

In April 2020, our new open access article on TRAVIS has been published. It describes many of the new features and algorithms which have been added to TRAVIS within the last nine years. Please have a look:

M. Brehm, M. Thomas, S. Gehrke, B. Kirchner:
“TRAVIS – A Free Analyzer for Trajectories from Molecular Simulation”,
J. Chem. Phys. 2020, 152 (16), 164105, DOI 10.1063/5.0005078.

Please see also our new tutorial on computing vibrational spectra with CP2k and TRAVIS (Oct 2018).


— Work Citing TRAVIS —

This is a list of publications which cite the original TRAVIS article from 2011. Currently, there are 539 such publications, written by 1201 different authors.
512 out of these (94.99 %) actually used TRAVIS for results in the manuscript.

Only showing results by author “Coutinho, J. A. P.”. Show all citations.

Go to Author List, go to Journal List.

10 citations match the query.  Show continuous list view.

— 2021 —

10 N. Schaeffer, D. O. Abranches, L. P. Silva, M. A. R. Martins, P. J. Carvalho, O. Russina, A. Triolo, L. Paccou, Y. Guinet, A. Hedoux, J. A. P. Coutinho:
"Non-ideality in Thymol + Menthol Type V Deep Eutectic Solvents"
ACS Sustainable Chem. Eng. 2021, 9 (5), 2203–2211.     (DOI 10.1021/acssuschemeng.0c07874 ) ⭳ Bib
Uses TRAVIS for SDF.

— 2020 —

9 H. Bastos, R. Bento, N. Schaeffer, J. A. P. Coutinho, G. Pérez-Sánchez:
"Using Coarse-Grained Molecular Dynamics to Rationalize Biomolecule Solubilization Mechanisms in Ionic Liquid-Based Colloidal Systems"
Phys. Chem. Chem. Phys. 2020, 22 (42), 24771–24783.     (DOI 10.1039/D0CP04942E ) ⭳ Bib
Uses TRAVIS for SDF.
8 S. J. R. Vargas, H. Passos, N. Schaeffer, J. A. P. Coutinho:
"Integrated Leaching and Separation of Metals Using Mixtures of Organic Acids and Ionic Liquids"
Molecules 2020, 25 (23), 5570.     (DOI 10.3390/molecules25235570 ) ⭳ Bib
Uses TRAVIS for SDF, Domain.
7 E. A. Crespo, N. Schaeffer, J. A. P. Coutinho, G. Perez-Sanchez:
"Improved Coarse-Grain Model to Unravel the Phase Behavior of 1-Alkyl-3-Methylimidazolium-Based Ionic Liquids through Molecular Dynamics Simulations"
J. Colloid Interface Sci. 2020, 574, 324–336.     (DOI 10.1016/j.jcis.2020.04.063 ) ⭳ Bib
Uses TRAVIS for SDF.

— 2019 —

6 N. Schaeffer, G. Pérez-Sánchez, H. Passos, J. R. B. Gomes, N. Papaiconomou, J. A. P. Coutinho:
"Mechanisms of Phase Separation in Temperature-Responsive Acidic Aqueous Biphasic Systems"
Phys. Chem. Chem. Phys. 2019, 21 (14), 7462–7473.     (DOI 10.1039/C8CP07750A ) ⭳ Bib
Uses TRAVIS for SDF.
5 D. O. Abranches, N. Schaeffer, L. P. Silva, M. A. R. Martins, S. P. Pinho, J. A. P. Coutinho:
"The Role of Charge Transfer in the Formation of Type I Deep Eutectic Solvent-Analogous Ionic Liquid Mixtures"
Molecules 2019, 24 (20), 3687.     (DOI 10.3390/molecules24203687 ) ⭳ Bib
Uses TRAVIS for SDF, Domain.

— 2016 —

4 M. L. S. Batista, H. Passos, B. J. M. Henriques, E. J. Maginn, S. P. Pinho, M. G. Freire, J. R. B. Gomes, J. A. P. Coutinho:
"Why Are Some Cyano-Based Ionic Liquids Better Glucose Solvents Than Water?"
Phys. Chem. Chem. Phys. 2016, 18 (28), 18958–18970.     (DOI 10.1039/C6CP02538B ) ⭳ Bib
Uses TRAVIS for SDF.

— 2015 —

3 M. L. S. Batista, K. A. Kurnia, S. P. Pinho, J. R. B. Gomes, J. A. P. Coutinho:
"Computational and Experimental Study of the Behavior of Cyano-Based Ionic Liquids in Aqueous Solution"
J. Phys. Chem. B 2015, 119 (4), 1567–1578.     (DOI 10.1021/jp510125x ) ⭳ Bib
Uses TRAVIS for SDF.
2 I. Khan, M. L. S. Batista, P. J. Carvalho, L. M. N. B. F. Santos, J. R. B. Gomes, J. A. P. Coutinho:
"Vapor–Liquid Equilibria of Imidazolium Ionic Liquids with Cyano Containing Anions with Water and Ethanol"
J. Phys. Chem. B 2015, 119 (32), 10287–10303.     (DOI 10.1021/acs.jpcb.5b03324 ) ⭳ Bib
Uses TRAVIS for SDF.
1 M. L. S. Batista, G. Pérez-Sánchez, J. R. B. Gomes, J. A. P. Coutinho, E. J. Maginn:
"Evaluation of the GROMOS 56aCARBO Force Field for the Calculation of Structural, Volumetric, and Dynamic Properties of Aqueous Glucose Systems"
J. Phys. Chem. B 2015, 119 (49), 15310–15319.     (DOI 10.1021/acs.jpcb.5b08155 ) ⭳ Bib
Uses TRAVIS for SDF.


— Author List —

Go to Article List, go to Journal List.

28 different authors contributed to the 10 articles shown above.

Citations ↓ A–ZAuthor Name ↓ A–Z
10(show)Coutinho, J. A. P.
6(show)Schaeffer, N.
5(show)Gomes, J. R. B.
4(show)Batista, M. L. S.
3(show)Passos, H.
3(show)Pérez-Sánchez, G.
3(show)Pinho, S. P.
2(show)Abranches, D. O.
2(show)Carvalho, P. J.
2(show)Maginn, E. J.
2(show)Martins, M. A. R.
2(show)Silva, L. P.
1(show)Bastos, H.
1(show)Bento, R.
1(show)Crespo, E. A.
1(show)Freire, M. G.
1(show)Guinet, Y.
1(show)Hedoux, A.
1(show)Henriques, B. J. M.
1(show)Khan, I.
1(show)Kurnia, K. A.
1(show)Paccou, L.
1(show)Papaiconomou, N.
1(show)Perez-Sanchez, G.
1(show)Russina, O.
1(show)Santos, L. M. N. B. F.
1(show)Triolo, A.
1(show)Vargas, S. J. R.

— Journal List —

Go to Article List, go to Author List.

The 10 articles shown above were published in 5 different journals.

CitationsJournal Name
3(show)J. Phys. Chem. B
3(show)Phys. Chem. Chem. Phys.
2(show)Molecules
1(show)ACS Sustainable Chem. Eng.
1(show)J. Colloid Interface Sci.